Unique molecular identifier powered ultra sensitive variant calling

machine learning

Pipeline Strand NGS

DNAseq Strand NGS

Strand NGS (Formerly Avadis NGS) is an integrated platform that provides analysis, management and visualization tools for next-generation sequencing data. It supports extensive workflows for alignment, RNA-Seq, small RNA-Seq, DNA-Seq, Methyl-Seq, MeDIP-Seq, and ChIP-Seq experiments.

Strand NGS (Formerly Avadis NGS) is an integrated platform that provides analysis, management and visualization tools for next-generation sequencing data. It supports extensive workflows for alignment, RNA-Seq, small RNA-Seq, DNA-Seq, Methyl-Seq, MeDIP-Seq, and ChIP-Seq experiments.

RNA-Seq

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RNA-Seq

Differential gene expression, identify novel genes, exons, novel splice junctions and more

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DNA-Seq

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DNA-Seq

Detect variants, identify effect on transcripts, structural variants, CNVs, and more

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ChIP-Seq

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ChIP-Seq

Identify transcription factor binding sites and histone modification sites using the PICS and MACS

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Small RNA-Seq

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Small RNA-Seq

Detect differentially expressed small RNAs, novel small RNA genes, identify mRNA targets and more

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Methyl-Seq

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Methyl-Seq

Detect differentially methylated regions/cytosines and study methylation effects

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More Features

Alignment & Data QC

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Alignment & Data QC

Find and filter out reads with poor mapping and alignment qualities

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Rich visualizations

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Rich visualizations

Identify poor quality reads, mapping quality, variant support views, coverage and other visualizations

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Genome browser

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Genome browser

Visualize annotations, multiple genomics regions at different zoom levels

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Server Edition

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Server Edition

Designed to cater to the needs of multi-member teams working on NGS data analysis

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Biological Interpretation

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Biological Interpretation

Learn how genes interact with each other using information from literature and canonical pathways

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support@strandngs.com
USA: 1-800-516-5181
ROW: +1-650-288-4559