Strand NGS | Next generation sequencing analysis software

DNAseq Strand NGS

Strand NGS (Formerly Avadis NGS) is an integrated platform that provides analysis, management and visualization tools for next-generation sequencing data. It supports extensive workflows for alignment, RNA-Seq, small RNA-Seq, DNA-Seq, Methyl-Seq, MeDIP-Seq, and ChIP-Seq experiments.

Strand NGS (Formerly Avadis NGS) is an integrated platform that provides analysis, management and visualization tools for next-generation sequencing data. It supports extensive workflows for alignment, RNA-Seq, small RNA-Seq, DNA-Seq, Methyl-Seq, MeDIP-Seq, and ChIP-Seq experiments.

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RNA-Seq

RNA-Seq

Differential gene expression, identify novel genes, exons, novel splice junctions and more

DNA-Seq

DNA-Seq

Detect variants, identify effect on transcripts, structural variants, CNVs, and more

ChIP-Seq

ChIP-Seq

Identify transcription factor binding sites and histone modification sites using the PICS and MACS

Small RNA-Seq

Small RNA-Seq

Detect differentially expressed small RNAs, novel small RNA genes, identify mRNA targets and more

Methyl-Seq

Methyl-Seq

Detect differentially methylated regions/cytosines and study methylation effects

More Features

Alignment & Data QC

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Alignment & Data QC

Find and filter out reads with poor mapping and alignment qualities

Rich visualizations

Rich visualizations

Identify poor quality reads, mapping quality, variant support views, coverage and other visualizations

Genome browser

Genome browser

Visualize annotations, multiple genomics regions at different zoom levels

Server Edition

Server Edition

Designed to cater to the needs of multi-member teams working on NGS data analysis

Biological Interpretation

Biological Interpretation

Learn how genes interact with each other using information from literature and canonical pathways

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Contact Support

support@strandngs.com
+1 408 8783324